Exploratory analysis of DESeq2 data

exploratory_analysis_deseq2(dds, species, metadata)

Arguments

dds

DESeqDataSet object created by DESeq2::DESeq

species

character string specifying the name of the species. Only 'human', and 'mouse' are supported at present. [DEFAULT = human].

metadata

list created by sanity_check and with raw count data stored in metadata$count$A and length-adjusted count data stored in metadata$count$B. Created as part of run_dea